STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000019074annotation not available (378 aa)    
Predicted Functional Partners:
ENSCHAP00000044156
annotation not available
   
 0.964
snx17
Sorting nexin 17.
    
 
 0.782
ENSCHAP00000029637
annotation not available
   
 0.779
ENSCHAP00000056445
annotation not available
    
 0.723
ENSCHAP00000057267
Golgi glycoprotein 1b.
    
 0.723
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.589
ENSCHAP00000001221
annotation not available
    
  0.576
ENSCHAP00000042429
Adaptor related protein complex 2 subunit mu 1b.
    
  0.576
ENSCHAP00000005045
Platelet/endothelial cell adhesion molecule 1.
   
 0.553
ENSCHAP00000007138
annotation not available
   
 0.553
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.