STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000019338annotation not available (332 aa)    
Predicted Functional Partners:
ENSCHAP00000047229
Protein tyrosine phosphatase non-receptor type 6.
   
 0.534
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.517
LOC105898973
Tyrosine-protein phosphatase non-receptor type 11-like.
   
 0.517
ENSCHAP00000005866
CD79a molecule, immunoglobulin-associated alpha.
   
 
 0.501
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
  0.485
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.485
ENSCHAP00000024727
Relaxin family peptide receptor 1.
    
  0.485
ENSCHAP00000028999
Relaxin family peptide receptor 2a.
    
  0.485
ENSCHAP00000030605
Relaxin family peptide receptor 2, like.
    
  0.485
ENSCHAP00000001500
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.476
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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