STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eaf1ELL associated factor 1. (258 aa)    
Predicted Functional Partners:
ENSCHAP00000062042
annotation not available
    
 0.991
ENSCHAP00000021867
AF4/FMR2 family, member 4.
    
 0.987
LOC105905602
RNA polymerase II elongation factor ELL-like.
    
 0.986
ENSCHAP00000058767
ELL associated factor 2.
  
 
0.985
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.984
ENSCHAP00000060990
Elongation factor, RNA polymerase II, 2.
    
 0.982
ENSCHAP00000039774
Interactor of little elongator complex ELL subunit 2.
    
 0.974
ENSCHAP00000033963
annotation not available
    
 0.973
polr2i
RNA polymerase II subunit I.
    
 0.969
polr2b
RNA polymerase II subunit B.
    
 0.968
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.