STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105908527Growth hormone secretagogue receptor type 1-like. (354 aa)    
Predicted Functional Partners:
ENSCHAP00000039757
Ghrelin/obestatin prepropeptide.
    
 0.988
sst
Somatostatin.
    
 0.910
NPY
Neuropeptide Y.
    
 0.902
LOC105891412
Growth hormone secretagogue receptor type 1-like.
  
  
 
0.831
ENSCHAP00000002285
Endothelin 1.
    
 0.819
ENSCHAP00000004177
Endothelin 1.
    
 0.819
ENSCHAP00000047713
Endothelin 3b.
    
  0.782
ENSCHAP00000060512
annotation not available
    
  0.782
ENSCHAP00000001232
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a.
    
  0.715
GNAO1
G protein subunit alpha o1.
    
  0.715
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.