STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000019441annotation not available (634 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
    
 0.890
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.833
ENSCHAP00000048431
Protein phosphatase 1, regulatory subunit 21.
    
   0.740
ENSCHAP00000014474
Si:dkey-61p9.11.
  
 0.730
ENSCHAP00000014741
annotation not available
  
 0.730
ENSCHAP00000014894
annotation not available
  
 0.730
fasn
Fatty acid synthase.
  
 0.730
atp5f1d
ATP synthase F1 subunit delta.
   
 0.730
ENSCHAP00000057172
annotation not available
  
 0.730
ENSCHAP00000054064
annotation not available
    
 0.720
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.