STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
toe1Target of EGR1, exonuclease. (524 aa)    
Predicted Functional Partners:
ENSCHAP00000049834
Snurportin 1.
    
 
 0.838
ENSCHAP00000038398
Decapping mRNA 2.
     
 0.781
exosc5
Exosome component 5.
     
 0.729
ENSCHAP00000059480
Exosome component 8.
     
 0.707
exosc9
Exosome component 9.
   
 
 0.702
exosc2
Exosome component 2.
   
 
 0.693
exosc3
Exosome component 3.
     
 0.687
exosc7
Exosome component 7.
     
 0.680
exosc1
Exosome component 1.
   
 
 0.656
ENSCHAP00000001778
Exosome component 6.
     
 0.598
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.