STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000019938annotation not available (110 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
      
 0.547
ENSCHAP00000050762
Sidekick cell adhesion molecule 1b.
      
 0.543
matk
Megakaryocyte-associated tyrosine kinase.
      
 0.538
drg2
Developmentally regulated GTP binding protein 2.
      
 0.438
ENSCHAP00000057247
Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA.
   
   0.427
ENSCHAP00000033876
Family with sequence similarity 133 member B.
      
 0.408
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.