STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020007annotation not available (474 aa)    
Predicted Functional Partners:
stub1
STIP1 homology and U-box containing protein 1.
 
 
    0.754
slc30a7
Solute carrier family 30 member 7.
  
 0.686
slc30a5
Solute carrier family 30 member 5.
  
 0.686
slc30a6
Solute carrier family 30 member 6.
  
 0.684
pfdn6
Prefoldin subunit 6.
   
  
 0.615
LOC105907990
Mitochondrial chaperone BCS1.
 
 
    0.613
ENSCHAP00000024099
Hydroxysteroid (17-beta) dehydrogenase 8.
 
    
 0.606
slc39a9
Solute carrier family 39 member 9.
    
 
0.604
ENSCHAP00000005895
annotation not available
    
 
 0.591
ENSCHAP00000011826
Solute carrier family 30 member 9.
     
 0.584
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.