STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020105Si:ch211-274f20.2. (528 aa)    
Predicted Functional Partners:
ENSCHAP00000011930
Heat shock protein 5.
   
 0.945
ENSCHAP00000012252
annotation not available
   
 0.945
ENSCHAP00000004633
Calreticulin 3b.
   
0.933
ENSCHAP00000035341
Calreticulin.
   
0.933
mogs
Mannosyl-oligosaccharide glucosidase.
    
 
 0.924
ENSCHAP00000037373
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.918
eftud2
Elongation factor Tu GTP binding domain containing 2.
 
    
 0.893
ENSCHAP00000058341
Ankyrin repeat domain 45.
   
 0.891
pdia3
Protein disulfide isomerase family A member 3.
   
 0.881
ENSCHAP00000030374
Glucosidase, alpha; neutral AB.
    
 0.868
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.