STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
castor2Cytosolic arginine sensor for mTORC1 subunit 2. (329 aa)    
Predicted Functional Partners:
ENSCHAP00000039888
Methyltransferase like 25.
    
 0.968
ENSCHAP00000036264
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.967
wdr59
WD repeat domain 59.
    
 0.958
ENSCHAP00000028370
WD repeat domain 24.
    
 0.953
seh1l
SEH1 like nucleoporin.
     
 0.953
ENSCHAP00000028620
DEP domain containing 5, GATOR1 subcomplex subunit.
     
 0.929
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
     
 0.928
nprl3
NPR3 like, GATOR1 complex subunit.
     
 0.927
ENSCHAP00000047769
NPR2 like, GATOR1 complex subunit.
     
 0.927
LOC105906309
Ras-related GTP-binding protein A.
     
 0.919
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.