STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020139Sarcolemma associated protein b. (393 aa)    
Predicted Functional Partners:
ENSCHAP00000026851
Programmed cell death 10b.
    
 
 0.883
ENSCHAP00000029470
Programmed cell death 10a.
    
 
 0.883
ENSCHAP00000026189
FGFR1 oncogene partner 2.
    
 
 0.868
sike1
Suppressor of IKBKE 1.
    
 
 0.868
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.864
ENSCHAP00000007350
annotation not available
    
 
 0.846
ENSCHAP00000020088
Striatin interacting protein 1.
    
 
 0.846
LOC105899369
MOB-like protein phocein.
    
 
 0.834
ENSCHAP00000049900
MOB family member 4, phocein.
    
 
 0.834
ppp2cb
Protein phosphatase 2 catalytic subunit beta.
    
 0.831
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.