STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020231Interleukin 12B, b. (311 aa)    
Predicted Functional Partners:
ENSCHAP00000043301
Si:dkey-88e18.2.
  
  
  0.881
ubtd2
Ubiquitin domain containing 2.
 
   
  0.609
UBTD1
Ubiquitin domain containing 1.
 
   
  0.595
ENSCHAP00000037408
Ubiquitin domain containing 1b.
 
   
  0.595
ENSCHAP00000012190
Galactose-1-phosphate uridylyltransferase.
     
 0.489
ENSCHAP00000000349
Leucine rich repeat containing 75Ba.
  
     0.452
il10
Interleukin 10.
      
 0.422
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.