STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020344annotation not available (115 aa)    
Predicted Functional Partners:
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.999
atp5f1c
ATP synthase F1 subunit gamma.
   
 0.999
ENSCHAP00000043428
ATP synthase peripheral stalk-membrane subunit b.
   
 0.999
ENSCHAP00000045660
annotation not available
   
 0.999
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
 0.999
atp5md
ATP synthase membrane subunit DAPIT.
   
  0.998
atp5f1d
ATP synthase F1 subunit delta.
   
 0.998
atp5f1a
methyl-CpG-binding domain protein 2-like.
   
 0.998
ENSCHAP00000060562
ATP synthase membrane subunit ea.
   
 0.996
ENSCHAP00000060764
annotation not available
   
 0.996
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.