STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020507FIC domain containing. (449 aa)    
Predicted Functional Partners:
ENSCHAP00000011930
Heat shock protein 5.
   
 
 0.925
ENSCHAP00000012252
annotation not available
   
 
 0.925
ENSCHAP00000058341
Ankyrin repeat domain 45.
   
 
 0.866
oat
Ornithine aminotransferase.
    
  0.734
kyat3
Kynurenine aminotransferase 3.
    
  0.655
ENSCHAP00000028925
annotation not available
    
  0.655
ENSCHAP00000044951
Hydroxylysine kinase, tandem duplicate 1.
    
  0.655
ENSCHAP00000047202
Glutamic pyruvate transaminase (alanine aminotransferase) 2, like.
    
  0.655
kyat1
Kynurenine aminotransferase 1.
    
  0.655
tat
Tyrosine aminotransferase.
    
  0.655
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.