STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020541annotation not available (799 aa)    
Predicted Functional Partners:
ENSCHAP00000037381
Nuclear prelamin A recognition factor-like.
   
 0.853
ENSCHAP00000008354
NADPH dependent diflavin oxidoreductase 1.
    
 0.768
ENSCHAP00000002563
annotation not available
  
 
 0.765
ciao2b
Cytosolic iron-sulfur assembly component 2B.
   
 0.754
ENSCHAP00000037283
MMS19 homolog, cytosolic iron-sulfur assembly component.
   
 0.754
ENSCHAP00000002718
NADH:ubiquinone oxidoreductase core subunit S3.
    
 0.733
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
     
 0.732
glrx3
Glutaredoxin 3.
    
 0.726
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
    
 0.720
abcb7
ATP binding cassette subfamily B member 7.
    
 0.712
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.