STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020587Sterol regulatory element binding transcription factor 2. (1181 aa)    
Predicted Functional Partners:
scap
SREBF chaperone.
   
 0.984
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.944
ENSCHAP00000049895
Niemann-Pick disease, type C1.
   
 0.943
en2
Engrailed homeobox 2.
   
 0.931
kpnb1
Karyopherin subunit beta 1.
    
 0.917
ENSCHAP00000030459
Peroxisome proliferator-activated receptor gamma, coactivator 1 beta.
    
 0.881
ENSCHAP00000022934
Mediator complex subunit 15.
    
 
 0.832
mbtps2
Membrane bound transcription factor peptidase, site 2.
    
 0.819
ENSCHAP00000038415
Membrane-bound transcription factor peptidase, site 1.
     
 0.776
ENSCHAP00000025501
CREB binding protein a.
    
 0.765
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.