STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020721Mitochondrial ribosomal protein L41. (135 aa)    
Predicted Functional Partners:
mrps12
Mitochondrial ribosomal protein S12.
   
 
 0.998
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.998
LOC105904489
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.998
ENSCHAP00000048732
Mitochondrial ribosomal protein L36.
   
 
 0.997
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.996
ENSCHAP00000055955
Mitochondrial ribosomal protein L47.
   
 
 0.996
ENSCHAP00000002735
Mitochondrial ribosomal protein L30.
   
 
 0.995
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.995
ENSCHAP00000013591
Mitochondrial ribosomal protein L11.
   
 0.995
mrpl3
Mitochondrial ribosomal protein L3.
   
  0.995
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.