STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020730annotation not available (376 aa)    
Predicted Functional Partners:
ENSCHAP00000009396
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
   0.562
ENSCHAP00000024533
annotation not available
      
 0.535
LOC105902549
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
      
 0.520
ENSCHAP00000016120
annotation not available
      
 0.429
gart
annotation not available
      
 0.410
ENSCHAP00000000573
Sulfiredoxin 1 homolog (S. cerevisiae).
      
 0.404
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.