STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020908Dedicator of cytokinesis 9b. (2045 aa)    
Predicted Functional Partners:
ENSCHAP00000018026
annotation not available
   
 0.892
LOC105906845
Cell division control protein 42 homolog.
   
 0.892
ENSCHAP00000003808
annotation not available
   
 0.765
ENSCHAP00000028284
annotation not available
   
 0.765
LOC105892187
Ras-related C3 botulinum toxin substrate 2.
   
 0.722
LOC105899959
Ras-related C3 botulinum toxin substrate 3.
   
 0.722
rac3
Rac family small GTPase 3.
   
 0.722
cops5
COP9 signalosome subunit 5.
    
  0.711
cops3
COP9 signalosome subunit 3.
    
  0.689
cops2
COP9 signalosome subunit 2.
    
  0.687
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.