STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP000000212775-methyltetrahydrofolate-homocysteine methyltransferase reductase. (589 aa)    
Predicted Functional Partners:
mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 0.964
ENSCHAP00000033279
Cytochrome b5 reductase 4.
    
 0.931
LOC105908670
Cystathionine beta-synthase-like.
  
 
 0.927
ENSCHAP00000025115
Si:dkey-34e4.1.
    
 0.926
ENSCHAP00000036561
Nitric oxide synthase 1 (neuronal) adaptor protein b.
    
 0.926
ENSCHAP00000056747
Nitric oxide synthase 1 (neuronal) adaptor protein a.
    
 0.926
ciapin1
Cytokine induced apoptosis inhibitor 1.
    
 0.914
suox
Sulfite oxidase.
     
 0.888
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
    
 0.864
ENSCHAP00000013490
Metabolism of cobalamin associated C.
     
 0.835
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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