STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895186methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like. (615 aa)    
Predicted Functional Partners:
ENSCHAP00000036416
methylcrotonoyl-CoA carboxylase 1 (alpha).
 
 0.994
ENSCHAP00000033225
propionyl-CoA carboxylase subunit alpha.
 
 0.993
nelfcd
Negative elongation factor complex member C/D.
  
 0.983
ivd
isovaleryl-CoA dehydrogenase.
 
 
 0.951
LOC105896091
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.935
ENSCHAP00000053707
4-hydroxyphenylpyruvate dioxygenase b.
  
 
 0.935
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.931
echs1
enoyl-CoA hydratase, short chain 1.
  
 
 0.916
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.915
cryl1
Crystallin lambda 1.
  
 
 0.911
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.