STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000021770Solute carrier family 2 member 1a. (516 aa)    
Predicted Functional Partners:
SLC2A4
Solute carrier family 2 member 4.
  
  
 
0.851
LOC105907515
Solute carrier family 2, facilitated glucose transporter member 1-like.
  
  
 
0.850
ENSCHAP00000042779
Solute carrier family 2 member 2.
  
  
 
0.829
ENSCHAP00000033279
Cytochrome b5 reductase 4.
   
  0.804
ENSCHAP00000040959
annotation not available
  
  
 
0.796
ENSCHAP00000047279
Solute carrier family 2 member 3a.
  
  
 
0.790
ENSCHAP00000001450
Solute carrier family 2 member 3b.
  
  
 
0.713
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.632
ENSCHAP00000041850
Thymidine kinase 1, soluble.
     
 0.624
cstf3
Cleavage stimulation factor subunit 3.
    
 0.617
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.