STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000021930Poly (ADP-ribose) glycohydrolase, like. (611 aa)    
Predicted Functional Partners:
ENSCHAP00000017150
Poly (ADP-ribose) polymerase 1.
  
 
 0.925
ENSCHAP00000018573
Poly (ADP-ribose) polymerase family, member 3.
    
 0.898
ENSCHAP00000029763
Von Willebrand factor A domain containing 5B2.
    
 0.876
pcna
Proliferating cell nuclear antigen.
    
   0.783
ENSCHAP00000057053
WD repeat and FYVE domain containing 3.
 
      0.703
ENSCHAP00000033992
Zgc:110269.
     
 0.591
fen1
Flap structure-specific endonuclease 1.
     
 0.591
polb
DNA polymerase beta.
     
 0.588
apex2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
     
 0.552
ENSCHAP00000028914
Polymerase (DNA directed), lambda.
     
 0.430
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.