STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd17cAbhydrolase domain containing 17C. (294 aa)    
Predicted Functional Partners:
LOC105895092
Non-specific lipid-transfer protein-like.
     
 0.855
ENSCHAP00000051341
Sterol carrier protein 2a.
     
 0.855
ENSCHAP00000016710
Lysophospholipase like 1.
     
 0.700
lypla1
Lysophospholipase 1.
     
 0.659
lypla2
Lysophospholipase 2.
     
 0.659
acot8
acyl-CoA thioesterase 8.
     
 0.560
ENSCHAP00000001108
ALG2 alpha-1,3/1,6-mannosyltransferase.
  
 
 0.547
gys1
Glycogen synthase 1.
   
 
 0.538
ENSCHAP00000010009
Phosphatidylinositol glycan anchor biosynthesis, class A.
   
 
 0.538
ENSCHAP00000029046
Phosphatidylinositol glycan anchor biosynthesis, class W.
   
 
 0.538
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.