STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000022148annotation not available (454 aa)    
Predicted Functional Partners:
ENSCHAP00000055348
annotation not available
  
0.867
ENSCHAP00000022762
annotation not available
  
0.864
ENSCHAP00000027391
WD repeat domain 90.
   
  0.863
ENSCHAP00000000313
annotation not available
  
0.861
tubb4b
Tubulin beta 4B class IVb.
  
0.860
ENSCHAP00000020868
annotation not available
  
0.859
ENSCHAP00000016464
annotation not available
  
 0.843
ENSCHAP00000061800
Dynein, cytoplasmic 1, intermediate chain 2a.
    
 0.832
ENSCHAP00000019913
Dynein, cytoplasmic 1, intermediate chain 2b.
    
 0.831
ENSCHAP00000049610
annotation not available
   
 
 0.827
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.