STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000022360Carboxymethylenebutenolidase homolog (Pseudomonas). (159 aa)    
Predicted Functional Partners:
ENSCHAP00000054064
annotation not available
  
 
 0.945
ENSCHAP00000038357
Monoglyceride lipase.
    
 0.903
galm
Galactose mutarotase.
     
 0.877
cryl1
Crystallin lambda 1.
  
 
 0.872
ENSCHAP00000032218
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
  
 
 0.860
ENSCHAP00000032539
Palmitoyl-protein thioesterase 2.
  
 
 0.860
ENSCHAP00000044759
Zgc:66024.
  
 
 0.860
ENSCHAP00000001047
annotation not available
  
 
 0.857
LOC105901218
Fructose-1,6-bisphosphatase 1-like.
   
 
  0.834
LOC105902633
Fructose-1,6-bisphosphatase 1-like.
   
 
  0.834
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.