STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mplkipM-phase specific PLK1 interacting protein. (192 aa)    
Predicted Functional Partners:
ENSCHAP00000011316
succinyl-CoA:glutarate-CoA transferase.
      
 0.564
ENSCHAP00000032895
Uroplakin 1a.
  
   
 0.554
rnf113a
Ring finger protein 113A.
      
 0.532
lrrc42
Leucine rich repeat containing 42.
      
 0.520
ENSCHAP00000027672
Uroplakin 3b.
  
     0.454
pbdc1
Polysaccharide biosynthesis domain containing 1.
      
 0.414
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.