ENSCHAP00000022470 protein (Clupea harengus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000022470

annotation not available (237 aa)

Predicted Functional Partners:

smarcb1

0.874

ENSCHAP00000009450

0.792

ENSCHAP00000055498

0.792

ENSCHAP00000041767

0.788

actl6a

0.788

ENSCHAP00000044262

0.782

phf2

0.740

mysm1

0.722

ENSCHAP00000010428

0.689

ENSCHAP00000061580

0.689

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000009450	ENSCHAP00000022470	ENSCHAP00000009450	ENSCHAP00000022470	Polybromo 1, like.	annotation not available	0.792
ENSCHAP00000009450	ENSCHAP00000041767	ENSCHAP00000009450	ENSCHAP00000041767	Polybromo 1, like.	Actin-like 6B.	0.978
ENSCHAP00000009450	ENSCHAP00000055498	ENSCHAP00000009450	ENSCHAP00000055498	Polybromo 1, like.	Polybromo 1.	0.925
ENSCHAP00000009450	actl6a	ENSCHAP00000009450	ENSCHAP00000055948	Polybromo 1, like.	Actin like 6A.	0.978
ENSCHAP00000009450	mysm1	ENSCHAP00000009450	ENSCHAP00000061173	Polybromo 1, like.	Myb like, SWIRM and MPN domains 1.	0.975
ENSCHAP00000009450	smarcb1	ENSCHAP00000009450	ENSCHAP00000036229	Polybromo 1, like.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.994
ENSCHAP00000010428	ENSCHAP00000022470	ENSCHAP00000010428	ENSCHAP00000022470	SIN3 transcription regulator family member B.	annotation not available	0.689
ENSCHAP00000010428	ENSCHAP00000044262	ENSCHAP00000010428	ENSCHAP00000044262	SIN3 transcription regulator family member B.	Sap30-like.	0.986
ENSCHAP00000010428	ENSCHAP00000061580	ENSCHAP00000010428	ENSCHAP00000061580	SIN3 transcription regulator family member B.	SIN3 transcription regulator family member Ab.	0.588
ENSCHAP00000010428	mysm1	ENSCHAP00000010428	ENSCHAP00000061173	SIN3 transcription regulator family member B.	Myb like, SWIRM and MPN domains 1.	0.548
ENSCHAP00000010428	smarcb1	ENSCHAP00000010428	ENSCHAP00000036229	SIN3 transcription regulator family member B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.481
ENSCHAP00000022470	ENSCHAP00000009450	ENSCHAP00000022470	ENSCHAP00000009450	annotation not available	Polybromo 1, like.	0.792
ENSCHAP00000022470	ENSCHAP00000010428	ENSCHAP00000022470	ENSCHAP00000010428	annotation not available	SIN3 transcription regulator family member B.	0.689
ENSCHAP00000022470	ENSCHAP00000041767	ENSCHAP00000022470	ENSCHAP00000041767	annotation not available	Actin-like 6B.	0.788
ENSCHAP00000022470	ENSCHAP00000044262	ENSCHAP00000022470	ENSCHAP00000044262	annotation not available	Sap30-like.	0.782
ENSCHAP00000022470	ENSCHAP00000055498	ENSCHAP00000022470	ENSCHAP00000055498	annotation not available	Polybromo 1.	0.792
ENSCHAP00000022470	ENSCHAP00000061580	ENSCHAP00000022470	ENSCHAP00000061580	annotation not available	SIN3 transcription regulator family member Ab.	0.689
ENSCHAP00000022470	actl6a	ENSCHAP00000022470	ENSCHAP00000055948	annotation not available	Actin like 6A.	0.788
ENSCHAP00000022470	mysm1	ENSCHAP00000022470	ENSCHAP00000061173	annotation not available	Myb like, SWIRM and MPN domains 1.	0.722
ENSCHAP00000022470	phf2	ENSCHAP00000022470	ENSCHAP00000060107	annotation not available	PHD finger protein 2.	0.740