STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105903135Cysteine and histidine-rich domain-containing protein 1-like. (397 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.985
ENSCHAP00000020723
Protein phosphatase 5, catalytic subunit.
   
 0.984
ENSCHAP00000037373
Heat shock protein 90, beta (grp94), member 1.
   
 0.981
ENSCHAP00000029009
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.935
ENSCHAP00000032552
annotation not available
   
 0.935
ENSCHAP00000046354
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.935
ENSCHAP00000002550
TNF receptor-associated protein 1.
   
 0.932
ENSCHAP00000029858
TSC complex subunit 1a.
   
 0.932
ENSCHAP00000030214
annotation not available
   
 0.932
ENSCHAP00000057215
TSC complex subunit 1b.
   
 0.932
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.