STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000022743Cytidine deaminase b. (148 aa)    
Predicted Functional Partners:
TYMP
Thymidine phosphorylase.
 
 
 0.943
ENSCHAP00000019571
Uridine phosphorylase 1.
  
 
 0.941
ENSCHAP00000041850
Thymidine kinase 1, soluble.
    
 0.899
ENSCHAP00000060338
Uridine phosphorylase 2.
  
 
 0.891
ENSCHAP00000060350
Uridine phosphorylase 2.
  
 
 0.891
LOC105907442
Deoxycytidine kinase-like.
    
 0.869
ephx2
Epoxide hydrolase 2.
    
 0.869
ENSCHAP00000033954
Deoxycytidine kinase.
    
 0.869
ENSCHAP00000047969
Thymidine kinase 2.
    
 0.860
ENSCHAP00000061740
Uridine-cytidine kinase 1.
    
 0.860
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.