STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000022908Latexin. (287 aa)    
Predicted Functional Partners:
ENSCHAP00000049553
Carboxypeptidase A1 (pancreatic).
    
 
 0.810
LOC105910298
Carboxypeptidase A2-like.
    
 
 0.810
ENSCHAP00000047201
ATP/GTP binding protein-like 2.
    
 
 0.655
agbl1
ATP/GTP binding protein like 1.
    
 
 0.486
ENSCHAP00000054334
ATP/GTP binding protein 1.
    
 
 0.486
ENSCHAP00000010492
annotation not available
    
 
 0.481
ENSCHAP00000032186
Carboxypeptidase B2 (plasma).
    
 
 0.481
ENSCHAP00000033348
Danio rerio centrosomal protein 162 (cep162), mRNA.
    
 
 0.481
ENSCHAP00000036126
Carboxypeptidase O.
    
 
 0.481
ENSCHAP00000036251
Carboxypeptidase O.
    
 
 0.481
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.