STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000022982Phosphatidylinositol-4-phosphate 5-kinase-like 1. (454 aa)    
Predicted Functional Partners:
ENSCHAP00000037623
Synaptojanin 1.
    
 0.880
ENSCHAP00000010816
annotation not available
    
 0.878
ENSCHAP00000034777
annotation not available
    
 0.878
ENSCHAP00000041371
Phospholipase C, delta 3b.
    
 0.878
ENSCHAP00000009859
Phosphatidylinositol 4-kinase, catalytic, alpha b.
   
 0.877
pik3cd
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
     
 0.877
ENSCHAP00000025932
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta.
     
 0.877
ENSCHAP00000041812
Phosphatidylinositol 4-kinase, catalytic, alpha a.
   
 0.877
ENSCHAP00000058416
Phospholipase C, delta 1b.
    
 0.877
LOC105891463
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.
     
 0.875
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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