STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnk1Potassium two pore domain channel subfamily K member 1. (337 aa)    
Predicted Functional Partners:
kcnk5
Potassium two pore domain channel subfamily K member 5.
     
0.677
ENSCHAP00000006439
Potassium channel, subfamily K, member 10b.
     
0.675
ENSCHAP00000007407
Potassium channel, subfamily K, member 10a.
     
0.675
ENSCHAP00000022790
Potassium channel, subfamily K, member 4a.
     
0.675
ENSCHAP00000024977
Potassium channel, subfamily K, member 2b.
     
0.675
kcnk2
Potassium two pore domain channel subfamily K member 2.
     
0.675
KCNK4
Potassium two pore domain channel subfamily K member 4.
     
0.675
LOC105899415
Potassium channel subfamily K member 5-like.
     
0.649
ENSCHAP00000052317
Potassium channel, subfamily K, member 17.
     
0.649
ENSCHAP00000010326
Potassium channel, voltage gated eag related subfamily H, member 7.
    
 0.642
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.