STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000023407Glucose-6-phosphate dehydrogenase. (697 aa)    
Predicted Functional Partners:
rbm45
RNA binding motif protein 45.
  
 0.984
pgls
6-phosphogluconolactonase.
 
 
 0.978
ENSCHAP00000043204
Glucose-6-phosphate isomerase b.
  
 
 0.972
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
 
 
0.965
ENSCHAP00000009742
Transaldolase 1.
  
 0.963
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
  
 0.932
ENSCHAP00000010135
Pyruvate dehydrogenase E1 alpha 1 subunit a.
  
 0.923
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.923
PGM1
Phosphoglucomutase-1-like.
  
 0.921
gnpda2
Glucosamine-6-phosphate deaminase 2.
  
 
 0.912
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.