STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105898461Septin-2. (376 aa)    
Predicted Functional Partners:
SEPTIN7
Septin 7.
  
0.979
ENSCHAP00000040034
Septin 15.
  
0.979
LOC105900397
septin-8-A.
  
0.972
ENSCHAP00000045587
Septin 6.
  
0.972
LOC105911973
Septin-11-like.
  
0.950
TMEM250
Transmembrane protein 250.
    
 0.896
LOC105892308
Neuronal-specific septin-3-like.
  
 
0.842
ENSCHAP00000035294
Septin 3.
  
 
0.842
ENSCHAP00000011143
Septin 9a.
  
 
0.841
ENSCHAP00000045824
Septin 12.
  
 
0.841
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.