STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000023668Zgc:136439. (286 aa)    
Predicted Functional Partners:
LOC105907596
Mannose-1-phosphate guanyltransferase alpha-B.
   
 0.970
ENSCHAP00000056121
GDP-mannose pyrophosphorylase Aa.
   
 0.970
eif2s2
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.945
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.944
ENSCHAP00000044620
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
  
 0.940
dpm1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
  
 0.938
uxs1
UDP-glucuronate decarboxylase 1.
  
 0.938
ENSCHAP00000001108
ALG2 alpha-1,3/1,6-mannosyltransferase.
  
 0.925
gmds
GDP-mannose 4,6-dehydratase.
    
 0.897
dpm3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.893
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.