STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000023850Rho GTPase activating protein 5. (1500 aa)    
Predicted Functional Partners:
LOC105908082
Transforming protein RhoA.
    
 0.937
LOC105893671
Transforming protein RhoA-like.
    
 0.927
LOC105890655
Transforming protein RhoA-like.
    
 0.927
LOC105904931
Transforming protein RhoA-like.
    
 0.923
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.923
LOC105901256
Ras GTPase-activating protein 1.
    
 0.913
LOC105890812
Ras GTPase-activating protein 1-like.
    
 0.913
ENSCHAP00000026040
V-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog.
    
 0.863
ENSCHAP00000011816
Rho GTPase activating protein 35a.
  
  
 
0.851
LOC105901059
Rho GTPase-activating protein 35-like.
  
  
 
0.851
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.