STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000023968Cholinergic receptor, nicotinic, alpha 2b (neuronal). (523 aa)    
Predicted Functional Partners:
ENSCHAP00000017344
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.851
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.850
chrng
Cholinergic receptor nicotinic gamma subunit.
  
 
 
0.819
LOC105903088
Acetylcholine receptor subunit beta-like.
  
 
 
0.818
ENSCHAP00000034401
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
 
 
0.817
chrne
Cholinergic receptor nicotinic epsilon subunit.
  
 
 
0.789
ENSCHAP00000060035
Si:ch73-380n15.2.
  
0.771
ENSCHAP00000030512
Si:ch211-39a7.1.
  
0.770
ENSCHAP00000051863
annotation not available
  
0.769
ENSCHAP00000009420
Cholinergic receptor, nicotinic, alpha 5.
  
 
0.768
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.