STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000024114Glycoprotein Ib platelet subunit beta. (209 aa)    
Predicted Functional Partners:
ENSCHAP00000041910
annotation not available
   
 0.977
LOC105900113
Platelet glycoprotein IX-like.
   
0.975
ENSCHAP00000048958
Von Willebrand factor.
   
 0.905
ENSCHAP00000034133
annotation not available
   
 
 0.882
ENSCHAP00000008511
Otogelin.
   
 0.808
ENSCHAP00000036663
Subcommissural organ spondin.
   
 0.808
ENSCHAP00000041655
annotation not available
   
 0.808
LOC105906050
Leucine-rich repeat-containing protein 15-like.
   
 
 0.807
ENSCHAP00000056896
annotation not available
   
 
0.807
ENSCHAP00000056905
annotation not available
   
 
0.807
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.