STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000024189annotation not available (504 aa)    
Predicted Functional Partners:
lsm14a
LSM14A mRNA processing body assembly factor.
   
 0.980
lsm1
LSM1 homolog, mRNA degradation associated.
   
 0.978
lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.977
lsm14b
LSM family member 14B.
   
 0.977
ENSCHAP00000038398
Decapping mRNA 2.
   
 0.976
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
  
 0.968
ENSCHAP00000019698
Decapping mRNA 1B.
   
 0.966
dcp1a
Decapping mRNA 1A.
   
 0.961
ENSCHAP00000002493
annotation not available
   
 0.960
ENSCHAP00000012583
PAT1 homolog 2.
   
 0.960
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.