STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000024246Siah E3 ubiquitin protein ligase 1. (286 aa)    
Predicted Functional Partners:
cacybp
Calcyclin binding protein.
    
 0.984
ENSCHAP00000025324
annotation not available
    
 0.884
CTNNB1
Catenin beta 1.
    
 0.884
UBE2N
Ubiquitin conjugating enzyme E2 N.
   
 0.864
ube2n
Ubiquitin conjugating enzyme E2 N.
   
 0.864
ENSCHAP00000001914
Axin 1.
    
 0.828
ENSCHAP00000007390
annotation not available
    
 0.828
ENSCHAP00000027948
Axin 2 (conductin, axil).
    
 0.828
AXIN2
Axin 2.
    
 0.828
ENSCHAP00000016153
APC regulator of WNT signaling pathway.
    
 0.823
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.