STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000024354annotation not available (355 aa)    
Predicted Functional Partners:
ENSCHAP00000013823
annotation not available
   
 0.747
cct2
Chaperonin containing TCP1 subunit 2.
     
 0.717
cd81
CD81 molecule.
    
 0.623
LOC105905136
CD81 antigen-like.
    
 0.623
ENSCHAP00000004204
annotation not available
   
 0.611
ENSCHAP00000004449
Complement 4B (Chido blood group).
   
 0.611
ENSCHAP00000004957
annotation not available
   
 0.611
ENSCHAP00000007160
annotation not available
   
 0.611
ENSCHAP00000007235
annotation not available
   
 0.611
LOC105909320
Complement C4-like.
   
 0.611
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.