STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED2Transmembrane p24 trafficking protein 2. (208 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
0.997
tmed4
Transmembrane p24 trafficking protein 4.
   
0.982
tmed9
Transmembrane p24 trafficking protein 9.
   
0.982
ENSCHAP00000023657
Si:ch211-255i20.3.
   
 0.974
ENSCHAP00000018748
annotation not available
   
 0.954
ENSCHAP00000035185
Transmembrane p24 trafficking protein 7.
   
0.954
ENSCHAP00000044476
Transmembrane p24 trafficking protein 3.
   
0.954
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.886
ENSCHAP00000024710
Surfeit 4.
   
 0.859
LOC105911418
Surfeit locus protein 4-like.
   
 0.859
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.