STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000024900annotation not available (1249 aa)    
Predicted Functional Partners:
ENSCHAP00000055703
WW domain containing transcription regulator 1.
   
 0.887
ENSCHAP00000005325
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.678
LOC105892101
Growth factor receptor-bound protein 2.
   
 0.638
gab1
GRB2 associated binding protein 1.
    
 0.600
ENSCHAP00000010500
Chloride channel 3.
    
 
 0.592
ENSCHAP00000020198
annotation not available
    
 
 0.592
ENSCHAP00000021046
Chloride channel, voltage-sensitive 5b.
    
 
 0.592
wwc3
WWC family member 3.
    
 
 0.592
wwc1
WW and C2 domain containing 1.
    
 
 0.592
clcn4
Chloride voltage-gated channel 4.
    
 
 0.592
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.