STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc1ER membrane protein complex subunit 1. (964 aa)    
Predicted Functional Partners:
emc4
ER membrane protein complex subunit 4.
    
 0.999
ENSCHAP00000042997
ER membrane protein complex subunit 2.
   
 0.999
emc10
ER membrane protein complex subunit 10.
   
 0.998
ENSCHAP00000025857
Membrane magnesium transporter 1.
    
 0.998
emc8
ER membrane protein complex subunit 8.
    
 0.997
LOC105899047
ER membrane protein complex subunit 3-like.
    
 0.994
LOC105904762
ER membrane protein complex subunit 3.
    
 0.994
emc9
ER membrane protein complex subunit 9.
    
 0.994
LOC105899453
ER membrane protein complex subunit 7-like.
    
 0.993
EMC7
ER membrane protein complex subunit 7.
    
 0.993
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.