STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000024964annotation not available (94 aa)    
Predicted Functional Partners:
ENSCHAP00000032095
Chemokine (C-X-C motif) receptor 3, tandem duplicate 2.
    
 0.882
ENSCHAP00000032133
Chemokine (C-X-C motif) receptor 3, tandem duplicate 1.
    
 0.881
ENSCHAP00000003834
Chemokine (C-X-C motif) ligand 19.
    
 0.855
ENSCHAP00000049482
Chemokine (C-X-C motif) ligand 8a.
   
 0.834
ENSCHAP00000032108
Chemokine (C-X-C motif) receptor 3, tandem duplicate 3.
    
  0.833
LOC105905820
Stromal cell-derived factor 1-like.
   
 0.763
ENSCHAP00000022916
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
   
 0.763
ENSCHAP00000025182
annotation not available
   
 
 0.712
ENSCHAP00000053970
Chemokine (C-C motif) receptor 10.
    
 0.698
cxcl14
C-X-C motif chemokine ligand 14.
    
 
 0.681
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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