STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fut7Fucosyltransferase 7. (344 aa)    
Predicted Functional Partners:
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.526
b3gnt3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
   
 
 0.524
st3gal4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4.
     
 0.517
ENSCHAP00000056378
Glucosaminyl (N-acetyl) transferase family member 7.
     
 0.510
B3GNT4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4.
     
 0.509
ENSCHAP00000018781
Si:dkey-160o24.3.
     
 0.509
b3galt2
Beta-1,3-galactosyltransferase 2.
     
 0.509
LOC105892436
Beta-hexosaminidase subunit alpha-like.
    
 0.493
ENSCHAP00000022769
Hexosaminidase B (beta polypeptide).
    
 0.493
ENSCHAP00000007944
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase).
     
 0.472
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.