STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000025275annotation not available (256 aa)    
Predicted Functional Partners:
ENSCHAP00000011939
annotation not available
    
0.619
ENSCHAP00000035982
annotation not available
  
 
 
0.598
ENSCHAP00000042273
annotation not available
  
 
 
0.579
ENSCHAP00000045679
annotation not available
  
 
  0.573
ENSCHAP00000029551
annotation not available
  
 
 
0.572
ENSCHAP00000042387
annotation not available
  
 
 
0.568
ENSCHAP00000039510
annotation not available
  
 
 
0.501
ENSCHAP00000003156
annotation not available
    
  0.497
ENSCHAP00000008564
Zmp:0000000846.
    
  0.497
ENSCHAP00000012495
annotation not available
    
  0.497
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.