STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000025300Neuronal growth regulator 1. (364 aa)    
Predicted Functional Partners:
iglon5
IgLON family member 5.
    
 
0.588
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
 
0.517
PTK7
Protein tyrosine kinase 7 (inactive).
    
 
0.517
ENSCHAP00000057113
Seizure related 6 homolog b.
   
 0.510
ENSCHAP00000038167
annotation not available
    
 0.489
ENSCHAP00000027178
Slit homolog 2 (Drosophila).
    
 0.486
slit1
Slit guidance ligand 1.
    
 0.486
ENSCHAP00000038964
Slit homolog 3 (Drosophila).
    
 0.486
nyx
Nyctalopin.
    
 0.486
ENSCHAP00000019155
Erb-b2 receptor tyrosine kinase 2.
    
  0.476
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.