STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000025481annotation not available (222 aa)    
Predicted Functional Partners:
ENSCHAP00000037045
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b.
     
 0.768
ENSCHAP00000018538
Dystroglycan 1.
     
 0.718
ENSCHAP00000040153
protein-O-mannosyltransferase 2.
     
 0.652
ENSCHAP00000054877
protein-O-mannosyltransferase 1.
     
 0.652
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.646
ENSCHAP00000055846
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
     
 0.646
ENSCHAP00000022295
Mannosidase, alpha, class 2A, member 2.
     
 0.508
man2a1
Mannosidase alpha class 2A member 1.
     
 0.508
ENSCHAP00000007182
annotation not available
    
 0.440
ENSCHAP00000007654
annotation not available
    
 0.440
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.